Remember to list any API changes below in `doc/source/api_changes.txt`. Version 0.17 ------------ * Update RELEASE.txt regarding Azure Pipelines after making changes to scikit-image-wheels repo. * Finalize ``skimage.future.graph`` API. * Finalize ``skimage.future.manual_segmentation`` API. Version 0.18 ------------ Version 0.19 ------------ * Set ``start_label`` to 1 in ``slic`` and remove the DeprecationWarning. * In ``skimage/draw/draw.py`` remove ``circle'' and related tests. * In ``skimage/segmentation/morphsnakes.py`` remove ``circle_level_set'' and related tests. * Also make sure to look in the function ``_init_level_set`` * In ``skimage/morphology/_flood_fill.py`` replace the deprecated parameter in flood_fill() ``inplace`` with ``in_place`` and update the tests. * In ``skimage/filters/rank/generic.py'' remove tophat and bottomhat (See #3614) * Remove the definition of `skimage.util.pad` and skimage/util/tests/test_arraypad.py. * Remove the warnings in ``skimage/filters/ridges.py`` from sato and hessian functions. * In ``skimage/color/colorconv.py``, remove `rgb2grey` and `grey2rgb`. * In ``skimage/color/colorconv.py``, remove the deprecation warnings from `rgb2gray`. * In ``skimage/transform/radon_transform.py``, remove ``deprate_kwarg`` decoration from ``iradon``. * In ``skimage/measure/profile.py``, set default mode to 'reflect' in `profile_line` and remove the deprecation warning. * In ``skimage/_shared/utils.py``, raise a ValueError instead of the warning when order > 0 and input array is bool in _set_order. * In ``skimage/transform/_warps.py``, raise a ValueError instead of the warning when anti_aliasing is True and input array is bool in resize. * In ``skimage/feature/__init__.py``, remove `register_translation`. * In ``skimage.measure._marching_cube_lewiner.py``, remove ``marching_cube_lewiner``. * In ``skimage.measure._marching_cube_classic.py``, remove ``marching_cube_classic``. * In ``skimage/color/colorconv.py``, remove the `alpha`and `is_rgb` arguments and the associated deprecation warnings from `gray2rgb`. * In ``skimage/color/colorlabel.py``, remove the `change_default_value` decorator from `label2rgb` and set `bg_label` default value to 0. * In ``skimage/feature/__init__.py``, remove `masked_register_translation`. Version 0.20 ------------ * In ``skimage/feature/peak.py``, remove the `indices` argument and the decorator `remove_arg`. * In ``skimage.measure._find_contours.py``, remove the `deprecate_kwarg` decorator from `find_contours`. * In ``skimage/feature/corner.py``, change `order` default to 'rc' in `structure_tensor`. * In ``skimage/feature/corner.py``, remove the `structure_tensor_eigvals` function. * Remove deprecated qt plugins, i.e. `qt_plugin.py`, `qt_plugin.ini` and `skivi.py` in `skimage/io/_plugins`. * Remove enrirely the folder skimage/scripts containing skivi app. Remove `scripts` related lines in MANIFEST.in, .codecov.yml, appveyor.yml, setup.py * Remove viewer app in `skimage/viewer` and remove `./viewer_examples/`. Remove `viewer_examples` occurences in `tools/check_sdist.py` and `tools/travis/script.sh` Version 1.0 ----------- * consider removing the argument `coordinates` in `skimage.segmentation.active_contour`, which has not effect. Other ----- * Check whether imread wheels are available, then re-enable testing imread on macOS. See https://github.com/scikit-image/scikit-image/pull/3898 * When ``numpy`` is set to > 1.16, one may simplify the implementation of of `feature.blob_log` using the vectorized version of ``np.logspace``. * Remove conditional import of ``scipy.fft`` in ``skimage._shared.fft`` once the minimum supported version of ``scipy`` reaches 1.4. * When ``numpy`` is set to >= 1.16, simplify ``draw.line_nd`` by using the vectorized version of ``np.linspace``. * Monitor when multibuild devel gets merged into master for python 3.8 compatibility https://github.com/matthew-brett/multibuild/issues/284 and update osx_install to point to the correct branch * Remove pillow version related warning for MPO file format in `io._plugins.pil_plugin.imread` when upgrading pillow min version to 6.0.0 * Remove pillow version related warning for CVE when pillow > 7.1.0 in `skimage/io/_plugins/pil_plugin.py` and `skimage/io/collection.py`. * When ``numpy`` is set to >= 1.16, remove the warning assertion in ``skimage/exposure/tests/test_exposure.py::test_rescale_nan_warning`` regarding ``invalid value encountered in reduce``. regarding ``Passing `np.nan` to mean no clipping in np.clip``. * Remove direct allocation of ``output`` from ``skimage/filters/_gaussian.py``, when ``scipy`` upgrades to 1.1. * Specify atol value in `cg` calls and remove condition on scipy's version in ``skimage/segmentation/random_walker_segmentation.py`` when ``scipy`` upgrades to 1.1. * Remove '--verify-repo=none' in tlmgr calls in ``tools/travis/osx_install.sh``, when texlive 2020 is available. * Once NumPy is set to >= 1.17, consider removing ``skimage.morphology._util._fast_pad``. * When sphinx-gallery>=0.9.0, remove the thumbnail_size in doc/source/conf.py as the default value will be comparable (#4801).